Basic Information
Locus ID:
CH01.4006
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 42090089 | 42091363 | + | CH01.4006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 44,138.54 Da | 51.03 | 67.08 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 89 | 143 | 5.06521E-6 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 84 | 147 | 1.3E-6 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 77 | 163 | 7.0E-6 | IPR036869 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 89 | 146 | 8.901089 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 288 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 4.26E-39 |
| RefSeq | XP_039785817.1 | SKI family transcriptional corepressor 1-like [Panicum virgatum] | 1.57E-211 |
| TrEMBL | A0A3L6TSD9 | J domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G17110 PE=4 SV=1 | 1.63E-213 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology