Basic Information
Locus ID:
CH01.3980
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 41798206 | 41802144 | - | CH01.3980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 58,259.17 Da | 47.94 | 99.59 | 0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 198 | 353 | 3.6E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 385 | 521 | 5.9E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 227 | 527 | 1.0E-31 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 165 | 527 | 6.3E-122 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 178 | 527 | 6.2E-104 | IPR004798 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 8.48E-201 |
| RefSeq | XP_039785775.1 | vacuolar cation/proton exchanger 2 isoform X2 [Panicum virgatum] | 4.34E-293 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 1.79E-264 | |
| TrEMBL | K4A871 | Vacuolar cation/proton exchanger OS=Setaria italica OX=4555 PE=3 SV=1 | 1.54E-302 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology