Basic Information
Locus ID:
CH01.3875
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 40761340 | 40765111 | + | CH01.3875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 63,555.86 Da | 50.64 | 83.17 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 237 | 509 | 7.0E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 219 | 515 | 3.24E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 312 | 521 | 7.6E-53 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 11 | 122 | 5.2E-20 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 195 | 311 | 7.0E-31 | - |
| SMART | SM00220 | serkin_6 | 236 | 515 | 5.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 236 | 495 | 37.573132 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 242 | 263 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 357 | 369 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 191 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 3.37E-84 |
| RefSeq | XP_051202874.1 | cysteine-rich receptor-like protein kinase 44 [Lolium perenne] | 4.35E-256 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 3.28E-83 | |
| TrEMBL | A0A5J9WGN8 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_06111 PE=4 SV=1 | 2.2E-294 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.3302, CH01.3875 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0252160, gene-QOZ80_3BG0275800 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_014935 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g34960.1 |