Basic Information
Locus ID:
CH01.3826
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 40332415 | 40338006 | - | CH01.3826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.38 | 52,533.81 Da | 62.35 | 56.87 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 387 | 443 | 8.4E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 218 | 274 | 2.2E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 216 | 276 | 5.23E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 378 | 446 | 3.92E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 203 | 277 | 2.2E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 373 | 439 | 6.2E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 386 | 445 | 9.5E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 217 | 275 | 1.1E-33 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 381 | 446 | 37.057144 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 218 | 276 | 23.789268 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 499 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 6.62E-101 |
| RefSeq | XP_039829141.1 | probable WRKY transcription factor 4 isoform X1 [Panicum virgatum] | 2.63E-287 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 6.4E-100 | |
| TrEMBL | A0A8T0MS54 | WRKY transcription factor 4 OS=Panicum virgatum OX=38727 GN=PVAP13_9NG515600 PE=4 SV=1 | 5.94E-286 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology