Basic Information
Locus ID:
CH01.3687
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 38888000 | 38890737 | + | CH01.3687 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 60,053.02 Da | 47.33 | 77.11 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 232 | 498 | 1.00385E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 228 | 497 | 1.3E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 211 | 505 | 3.33E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 198 | 301 | 1.4E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 302 | 513 | 5.1E-65 | - |
| SMART | SM00220 | serkin_6 | 226 | 502 | 3.5E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 226 | 498 | 36.809895 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 348 | 360 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 1.57E-160 |
| RefSeq | XP_034574408.1 | probable serine/threonine-protein kinase At1g01540 [Setaria viridis] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 1.51E-159 | |
| TrEMBL | A0A4U6T2J5 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G349100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology