Basic Information
Locus ID:
CH01.3582
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 37909112 | 37919143 | + | CH01.3582 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 212,223.48 Da | 41.33 | 83.68 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 359 | 400 | 4.70866E-18 | - |
| CDD | cd01989 | STK_N | 7 | 146 | 2.04651E-35 | - |
| CDD | cd01853 | Toc34_like | 804 | 1045 | 9.32835E-124 | - |
| Pfam | PF04564 | U-box domain | 355 | 426 | 6.0E-13 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 1789 | 1921 | 6.5E-23 | IPR000719 |
| Pfam | PF04548 | AIG1 family | 828 | 964 | 2.1E-30 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1185 | 1440 | 5.1E-118 | IPR024283 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1765 | 1924 | 1.35E-41 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 823 | 1025 | 2.7E-17 | IPR027417 |
| SUPERFAMILY | SSF57850 | RING/U-box | 350 | 428 | 4.33E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1761 | 1860 | 4.5E-26 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 354 | 432 | 5.9E-22 | IPR013083 |
| Gene3D | G3DSA:3.40.50.300 | - | 793 | 1047 | 7.7E-57 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1861 | 1925 | 7.2E-15 | - |
| SMART | SM00220 | serkin_6 | 1787 | 1925 | 5.1E-5 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 358 | 421 | 1.0E-18 | IPR003613 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 705 | 1458 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 825 | 1055 | 31.765999 | IPR006703 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1787 | 1926 | 23.481533 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 354 | 428 | 22.363695 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1906 | 1918 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1793 | 1814 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 753 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1080 | 1110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 745 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1083 | 1104 | - | - |
| Coils | Coil | Coil | 192 | 222 | - | - |
| Coils | Coil | Coil | 1649 | 1669 | - | - |
| Coils | Coil | Coil | 237 | 264 | - | - |
| Coils | Coil | Coil | 1579 | 1627 | - | - |
| Coils | Coil | Coil | 1696 | 1716 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_034572829.1 | translocase of chloroplast 120, chloroplastic-like [Setaria viridis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9XM61 | U-box domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology