Basic Information
Locus ID:
CH01.3249
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 34162445 | 34165541 | + | CH01.3249 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.44 | 73,635.31 Da | 50.71 | 83.31 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 365 | 631 | 2.26456E-88 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 26 | 125 | 5.4E-17 | IPR002902 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 633 | 677 | 1.1E-7 | IPR021820 |
| Pfam | PF01657 | Salt stress response/antifungal | 166 | 248 | 1.1E-8 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 360 | 563 | 4.8E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 658 | 2.29E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 646 | 1.2E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 145 | 251 | 2.2E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 18 | 128 | 1.4E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 434 | 3.0E-37 | - |
| SMART | SM00220 | serkin_6 | 359 | 638 | 4.5E-33 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 143 | 251 | 16.724205 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 646 | 38.463573 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 20 | 128 | 19.910545 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 20. Encodes a cysteine-rich receptor-like protein kinase. | 1.05E-145 |
| RefSeq | XP_034574436.1 | cysteine-rich receptor-like protein kinase 10 [Setaria viridis] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 2.46E-152 | |
| TrEMBL | A0A4U6T213 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G306000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology