Basic Information
Locus ID:
CH01.3248
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 34153735 | 34160978 | + | CH01.3248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 71,851.43 Da | 48.57 | 89.26 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 346 | 612 | 4.51358E-95 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 22 | 112 | 5.1E-8 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 236 | 1.1E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 343 | 612 | 5.3E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 323 | 636 | 4.86E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 300 | 415 | 2.2E-38 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 18 | 115 | 2.0E-9 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 148 | 238 | 2.0E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 416 | 623 | 7.3E-60 | - |
| SMART | SM00220 | serkin_6 | 340 | 612 | 4.2E-36 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 127 | 238 | 16.543163 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 340 | 618 | 39.099602 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 5 | 116 | 11.130007 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 346 | 368 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 461 | 473 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 4.52E-140 |
| RefSeq | XP_034572351.1 | cysteine-rich receptor-like protein kinase 10 [Setaria viridis] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 4.37E-139 | |
| TrEMBL | A0A4U6T3R0 | Cysteine-rich receptor-like protein kinase 10 OS=Setaria viridis OX=4556 GN=SEVIR_9G305900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology