Basic Information
Locus ID:
CH01.3184
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 33044728 | 33045799 | + | CH01.3184 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.39 | 36,954.08 Da | 79.66 | 62.41 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 81 | 199 | 1.55E-6 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 164 | 241 | 5.2E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 282 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70110.1 | Concanavalin A-like lectin protein kinase family protein. | 9.71E-18 |
| RefSeq | XP_012698093.1 | L-type lectin-domain containing receptor kinase IV.1 [Setaria italica] | 3.48E-43 |
| O04534 | Putative L-type lectin-domain containing receptor kinase V.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK51 PE=3 SV=1 | 9.65E-17 | |
| TrEMBL | K4AI27 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101771227 PE=3 SV=1 | 7.88E-42 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g150080 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.194.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq08G2045, Ceq08G2058, Ceq08G2065, Ceq08G2070, Ceq08G2072 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g00100 |
| Poaceae | Echinochloa crus-galli | 1 | CH01.3184 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g00970 |