Basic Information
Locus ID:
CH01.3091
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 31192679 | 31195571 | - | CH01.3091 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 53,365.23 Da | 54.16 | 78.35 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 56 | 1.5E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 71 | 1.14E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 65 | 1.5E-9 | - |
| SMART | SM00256 | fbox_2 | 15 | 57 | 1.5E-9 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 57 | 10.716211 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 328 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044360929.1 | uncharacterized protein LOC123082729 [Triticum aestivum] | 1.6E-45 |
| TrEMBL | A0A5J9WPL5 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_01450 PE=4 SV=1 | 2.84E-122 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH01.3091 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0119720 |