Basic Information
Locus ID:
CH01.2712
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 24573612 | 24574700 | - | CH01.2712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 40,290.95 Da | 56.34 | 91.71 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 37 | 73 | 1.4E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 190 | 283 | 8.89E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 71 | 1.96E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 75 | 2.8E-8 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 34 | 70 | 8.83511 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025791941.1 | uncharacterized protein LOC112873137 [Panicum hallii] | 9.46E-66 |
| TrEMBL | A0A4U6VCB8 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G123100v2 PE=4 SV=1 | 1.33E-143 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||