Basic Information
Locus ID:
CH01.2342
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 20227648 | 20232272 | + | CH01.2342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.85 | 76,149.05 Da | 55.38 | 84.59 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 454 | 699 | 6.3E-19 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 702 | 1.59E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 709 | 1.9E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 492 | 8.0E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 714 | 23.354328 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 235 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06700.1 | Protein kinase superfamily protein. | 1.8E-58 |
| RefSeq | XP_039827192.1 | PTI1-like tyrosine-protein kinase 2 [Panicum virgatum] | 1.41E-102 |
| Q8H1G6 | PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PTI11 PE=1 SV=1 | 1.74E-57 | |
| TrEMBL | A0A8T0MM39 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG327673 PE=4 SV=1 | 9.69E-100 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||