Basic Information
Locus ID:
CH01.227
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 1679468 | 1683068 | + | CH01.227 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 46,550.89 Da | 54.83 | 77.83 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 106 | 361 | 1.11271E-108 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 102 | 361 | 1.3E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 97 | 387 | 1.62E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 396 | 6.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 89 | 179 | 8.2E-21 | - |
| SMART | SM00220 | serkin_6 | 100 | 365 | 1.5E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 365 | 44.329182 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 220 | 232 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 106 | 127 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 176 | 189 | 2.9E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 332 | 354 | 2.9E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 288 | 310 | 2.9E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 232 | 2.9E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 57 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01850.1 | Protein kinase superfamily protein. | 2.31E-157 |
| RefSeq | XP_004981286.1 | serine/threonine-protein kinase HT1 isoform X1 [Setaria italica] | 3.32E-258 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 9.76E-67 | |
| TrEMBL | A0A1E5W6K0 | Serine/threonine-protein kinase HT1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006052 PE=3 SV=1 | 5.28E-257 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology