Basic Information
Locus ID:
CH01.2203
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 18689520 | 18690521 | - | CH01.2203 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 35,777.66 Da | 43.39 | 83.63 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 41 | 309 | 2.9E-58 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 314 | 1.75E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 322 | 5.7E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 138 | 4.2E-21 | - |
| SMART | SM00220 | serkin_6 | 41 | 309 | 4.9E-79 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 309 | 41.997074 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 47 | 70 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G33770.1 | Protein kinase superfamily protein. | 3.54E-49 |
| RefSeq | XP_039827169.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 1.05E-199 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 7.39E-64 | |
| TrEMBL | A0A3L6TME9 | Putative cyclin-dependent kinase F-2 OS=Panicum miliaceum OX=4540 GN=C2845_PM01G40160 PE=3 SV=1 | 1.63E-200 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology