HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: CH01.1911
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH01 15561032 15563494 - CH01.1911
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
11.66 24,059.59 Da 100.36 63.11 -0.48
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 1 20 - -
MobiDBLite mobidb-lite consensus disorder prediction 78 93 - -
MobiDBLite mobidb-lite consensus disorder prediction 40 109 - -
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Arecaceae Cocos nucifera 1 COCNU_14G002950
Brassicaceae Brassica nigra 1 BniB01g044820.2N
Plantaginaceae Plantago ovata 1 Pov_00007702
Poaceae Echinochloa crus-galli 4 CH01.1911, CH06.2806, CH06.3125, CH06.822
Poaceae Sporobolus alterniflorus 1 Chr11G005110
Zosteraceae Zostera marina 5 Zosma02g12200.v3.1, Zosma02g12590.v3.1, Zosma03g11790.v3.1 ...
Zosma05g21260.v3.1, Zosma06g13530.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.