HalophFGD

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Basic Information
Locus ID: CH01.1830
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
CH01 14792536 14793835 - CH01.1830
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.07 43,553.32 Da 49.07 86.93 0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 6 46 7.1E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 7 62 2.75E-9 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_014758656.1 uncharacterized protein LOC100831682 [Brachypodium distachyon] 4.39E-20
TrEMBL A0A1E5WMV3 Uncharacterized protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000245 PE=4 SV=1 4.72E-113
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH01.1551, AH01.1552, AH03.266, CH01.1829, CH01.1830
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.