HalophFGD

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Basic Information
Locus ID: CH01.1792
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH01 14517336 14519948 + CH01.1792
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
11.61 41,674.92 Da 75.92 64.72 -0.53
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 238 272 - -
MobiDBLite mobidb-lite consensus disorder prediction 206 319 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 135 - -
MobiDBLite mobidb-lite consensus disorder prediction 117 135 - -
MobiDBLite mobidb-lite consensus disorder prediction 26 45 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL A0A368R945 DUF1421 domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_5G266300v2 PE=4 SV=1 3.7E-6
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 44 AH01.3223, AH04.549, BH01.1616, BH01.1964, BH01.268, BH08.89 ...
BH01.3500, BH01.3920, BH01.4321, BH01.5266, BH02.2538, BH02.264, BH02.2694, BH02.337, BH02.3869, BH02.3927, BH02.4624, BH03.2070, BH03.2074, BH03.2296, BH03.2297, BH03.2946, BH03.3272, BH03.3319, BH03.3459, BH03.3744, BH03.3745, BH04.2151, BH05.2811, BH05.750, BH06.2469, BH06.2805, BH06.2818, BH07.2852, BH07.3485, BH07.3619, BH09.2730, CH01.1792, CH01.5534, CH01.5535, CH02.3555, CH03.4093, CH04.1336, CH06.2448
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.