Basic Information
Locus ID:
CH01.1567
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 12357386 | 12363019 | - | CH01.1567 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 77,635.11 Da | 43.32 | 89.15 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 416 | 687 | 2.93733E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 684 | 4.4E-44 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 3.3E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 164 | 186 | 1.9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 94 | 151 | 1.1E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 246 | 4.68E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 684 | 3.19E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 487 | 1.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 707 | 7.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 255 | 1.7E-52 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 162 | 185 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 120 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 208 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 161 | 32.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 687 | 37.573132 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 95 | 108 | 3.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 138 | 151 | 3.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 289 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 4.23E-218 |
| RefSeq | XP_039788537.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Panicum virgatum] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 4.07E-217 | |
| TrEMBL | A0A8T0WPY6 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG246200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology