Basic Information
Locus ID:
CH01.1488
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 11594408 | 11607767 | + | CH01.1488 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 55,103.87 Da | 50.23 | 84.68 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 105 | 281 | 3.2E-30 | IPR000719 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 411 | 455 | 3.7E-12 | IPR011598 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 25 | 299 | 2.32E-52 | IPR011009 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 411 | 459 | 2.36E-15 | IPR036638 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 312 | 1.8E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 15 | 82 | 2.2E-8 | - |
| Gene3D | G3DSA:4.10.280.10 | - | 407 | 457 | 3.4E-15 | IPR036638 |
| SMART | SM00220 | serkin_6 | 37 | 283 | 1.2E-9 | IPR000719 |
| SMART | SM00353 | finulus | 412 | 461 | 5.3E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 406 | 455 | 16.640553 | IPR011598 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 289 | 24.993872 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 135 | 147 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67520.5 | - | 2.16E-44 |
| RefSeq | XP_002442140.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 isoform X1 [Sorghum bicolor] | 2.07E-101 |
| O64793 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana OX=3702 GN=At1g67520 PE=2 SV=3 | 1.45E-42 | |
| TrEMBL | A0A0A8XN46 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 1.84E-116 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||