Basic Information
Locus ID:
CH01.1411
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 10896128 | 10897195 | - | CH01.1411 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 38,740.12 Da | 43.39 | 81.10 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 26 | 318 | 3.7E-59 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 328 | 7.15E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 104 | 1.4E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 350 | 2.3E-55 | - |
| SMART | SM00220 | serkin_6 | 26 | 318 | 9.1E-77 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 318 | 42.774445 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 55 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 1.59E-46 |
| RefSeq | XP_004971535.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 4.13E-202 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 1.2E-68 | |
| TrEMBL | K3XPP5 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101786752 PE=3 SV=1 | 9.35E-201 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology