Basic Information
Locus ID:
CH01.1401
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 10816125 | 10816790 | + | CH01.1401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 24,637.29 Da | 41.24 | 85.20 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 1 | 185 | 7.5E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 188 | 1.31E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 206 | 2.0E-53 | - |
| SMART | SM00220 | serkin_6 | 1 | 185 | 4.2E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 185 | 29.389545 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 16 | 28 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 4.98E-41 |
| RefSeq | XP_004971535.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 3.12E-119 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 4.33E-44 | |
| TrEMBL | K3XPP5 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101786752 PE=3 SV=1 | 7.07E-118 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology