Basic Information
Locus ID:
CH01.1293
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 9964217 | 9968434 | + | CH01.1293 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 82,793.25 Da | 56.30 | 79.60 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 443 | 717 | 2.4E-49 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 26 | 308 | 7.9E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 445 | 734 | 8.9E-70 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 326 | 5.8E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 436 | 515 | 5.5E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 516 | 733 | 2.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 116 | 1.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 117 | 327 | 4.0E-48 | - |
| SMART | SM00220 | serkin_6 | 435 | 717 | 2.6E-64 | IPR000719 |
| SMART | SM00220 | serkin_6 | 26 | 308 | 1.2E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 717 | 38.195026 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 308 | 38.039555 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 148 | 160 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 55 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 549 | 561 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 444 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 2.3E-47 |
| RefSeq | XP_025791573.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 1.18E-177 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 2.92E-60 | |
| TrEMBL | A0A1E5WFQ6 | Putative cyclin-dependent kinase F-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002760 PE=4 SV=1 | 2.22E-285 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology