Basic Information
Locus ID:
CH01.1263
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Calcium-dependent channel, 7TM region, putative phosphate
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 9669030 | 9674035 | + | CH01.1263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 87,025.34 Da | 44.09 | 101.26 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 356 | 620 | 7.3E-75 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 163 | 1.7E-36 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 344 | 1.3E-25 | IPR027815 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 738 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 5.85E-279 |
| RefSeq | XP_004982191.1 | CSC1-like protein RXW8 [Setaria italica] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 5.62E-278 | |
| TrEMBL | K4A656 | CSC1-like protein RXW8 OS=Setaria italica OX=4555 GN=101764716 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology