Basic Information
Locus ID:
CH01.1181
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 8869130 | 8873782 | - | CH01.1181 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 67,140.57 Da | 35.59 | 88.35 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 272 | 570 | 1.00558E-129 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 241 | 557 | 1.2E-95 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 272 | 580 | 1.35E-70 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 274 | 575 | 1.9E-43 | IPR029044 |
| Coils | Coil | Coil | 141 | 171 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 2.7200000000203E-314 |
| RefSeq | XP_025795430.1 | polygalacturonate 4-alpha-galacturonosyltransferase-like [Panicum hallii] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 2.6099999999897E-313 | |
| TrEMBL | A0A3L6S6T3 | Hexosyltransferase OS=Panicum miliaceum OX=4540 GN=C2845_PM02G02190 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology