Basic Information
Locus ID:
CH01.1000
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 7581717 | 7585536 | + | CH01.1000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 102,759.25 Da | 40.35 | 85.07 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 618 | 890 | 4.16319E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 350 | 383 | 0.016 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 81 | 0.0013 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 615 | 843 | 5.6E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 589 | 899 | 4.67E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 450 | 1.45E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 908 | 2.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 346 | 472 | 2.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 341 | 5.9E-72 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 574 | 689 | 3.0E-37 | - |
| SMART | SM00220 | serkin_6 | 612 | 898 | 6.0E-46 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 612 | 893 | 41.106632 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 618 | 640 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 946 | 967 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 500 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 2.43E-304 |
| RefSeq | XP_004981977.1 | receptor protein kinase TMK1 [Setaria italica] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 2.34E-303 | |
| TrEMBL | A0A835B1Y2 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_048222 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology