Basic Information
Locus ID:
BniS06172g080.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| utg6172 | 45559 | 47873 | + | BniS06172g080.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 63,596.94 Da | 54.18 | 75.11 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 152 | 230 | 1.79344E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 149 | 244 | 5.5E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 270 | 362 | 1.9E-10 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 446 | 560 | 4.38E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 151 | 244 | 4.63E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 278 | 385 | 5.6E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 142 | 268 | 9.3E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 149 | 247 | 6.9E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 262 | 364 | 9.9E-9 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 147 | 216 | 13.715211 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 36 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_013747886.2 | BTB/POZ domain-containing protein At2g46260 [Brassica napus] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | V4N279 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001385mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology