Basic Information
Locus ID:
BniB08g073500.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
receptor-like protein kinase At2g42960
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 65261547 | 65263510 | + | BniB08g073500.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 56,384.65 Da | 41.49 | 89.64 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 189 | 455 | 1.41997E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 186 | 452 | 6.4E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 167 | 461 | 8.9E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 164 | 258 | 2.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 259 | 474 | 1.8E-66 | - |
| SMART | SM00220 | serkin_6 | 183 | 461 | 3.6E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 183 | 461 | 39.749767 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 189 | 212 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 500 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018492330.1 | PREDICTED: probable receptor-like protein kinase At2g42960 [Raphanus sativus] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6J0P6T2 | probable receptor-like protein kinase At2g42960 OS=Raphanus sativus OX=3726 GN=LOC108862635 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology