HalophFGD

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Basic Information
Locus ID: BniB08g072890.2N
Species & Taxonomic ID: Brassica nigra & 3710
Genome Assembly: N100
Description: protein modification by small protein conjugation or removal
Maps and Mapping Data
Chromosome Start End Strand ID
B8 64977016 64985966 - BniB08g072890.2N
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.38 131,999.19 Da 40.35 97.42 -0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 638 757 4.00071E-22 IPR002083
CDD cd00121 MATH 885 1010 1.23257E-29 IPR002083
CDD cd00121 MATH 67 193 3.94809E-16 IPR002083
Pfam PF00917 MATH domain 891 1006 1.2E-7 IPR002083
Pfam PF00917 MATH domain 638 756 6.8E-5 IPR002083
SUPERFAMILY SSF49599 TRAF domain-like 883 1014 2.13E-31 -
SUPERFAMILY SSF49599 TRAF domain-like 638 766 4.91E-25 -
SUPERFAMILY SSF49599 TRAF domain-like 353 465 6.54E-9 -
SUPERFAMILY SSF49599 TRAF domain-like 66 201 1.36E-17 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 638 771 3.8E-27 IPR008974
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 876 1014 1.0E-32 IPR008974
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 400 469 1.4E-5 IPR008974
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 48 199 1.4E-21 IPR008974
SMART SM00061 math_3 886 991 3.2E-11 IPR002083
SMART SM00061 math_3 635 737 0.0031 IPR002083
ProSiteProfiles PS50144 MATH/TRAF domain profile. 630 756 22.794476 IPR002083
ProSiteProfiles PS50144 MATH/TRAF domain profile. 884 1010 30.311909 IPR002083
ProSiteProfiles PS50144 MATH/TRAF domain profile. 65 192 18.549938 IPR002083
Coils Coil Coil 1102 1122 - -
Coils Coil Coil 857 877 - -
Coils Coil Coil 606 626 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K00276 (primary-amine oxidase [EC:1.4.3.21])
Pathway:
ko00260 (Glycine, serine and threonine metabolism) map00260 (Glycine, serine and threonine metabolism) ko00350 (Tyrosine metabolism) map00350 (Tyrosine metabolism) ko00360 (Phenylalanine metabolism) map00360 (Phenylalanine metabolism) ko00410 (beta-Alanine metabolism) map00410 (beta-Alanine metabolism) ko00950 (Isoquinoline alkaloid biosynthesis) map00950 (Isoquinoline alkaloid biosynthesis) ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide) R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide) R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide) R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia) R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide) R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G58410.2 - 0
RefSeq XP_018488419.1 PREDICTED: MATH domain and coiled-coil domain-containing protein At3g58340-like [Raphanus sativus] 0
Swiss-Prot Q9M2H5 MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2 0
TrEMBL A0A3P5YNK8 MATH domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA09T40544Z PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000020776, gene:ENSEOMG00000042009
Anacardiaceae Pistacia vera 2 pistato.v30053150, pistato.v30053760
Asparagaceae Asparagus officinalis 3 AsparagusV1_04.1844.V1.1, AsparagusV1_05.3047.V1.1 ...
AsparagusV1_09.696.V1.1
Brassicaceae Arabidopsis thaliana 38 AT1G31370.1, AT1G31380.1, AT1G31390.1, AT1G31400.1 ...
AT2G01790.1, AT2G05400.1, AT2G05410.1, AT2G05420.1, AT2G05430.1, AT2G42460.1, AT2G42470.1, AT2G42480.1, AT3G27040.1, AT3G29580.1, AT3G44790.1, AT3G44800.1, AT3G44805.1, AT3G58200.1, AT3G58210.1, AT3G58220.2, AT3G58230.1, AT3G58240.1, AT3G58250.1, AT3G58260.1, AT3G58270.1, AT3G58280.1, AT3G58290.1, AT3G58320.1, AT3G58330.1, AT3G58340.1, AT3G58350.1, AT3G58360.1, AT3G58370.1, AT3G58380.1, AT3G58400.1, AT3G58410.1, AT3G58430.1, AT3G58440.1
Brassicaceae Eutrema salsugineum 38 Thhalv10005920m.g.v1.0, Thhalv10006412m.g.v1.0 ...
Thhalv10006427m.g.v1.0, Thhalv10006437m.g.v1.0, Thhalv10006449m.g.v1.0, Thhalv10006467m.g.v1.0, Thhalv10006470m.g.v1.0, Thhalv10006486m.g.v1.0, Thhalv10008254m.g.v1.0, Thhalv10010958m.g.v1.0, Thhalv10011795m.g.v1.0, Thhalv10011971m.g.v1.0, Thhalv10011981m.g.v1.0, Thhalv10011998m.g.v1.0, Thhalv10012015m.g.v1.0, Thhalv10012031m.g.v1.0, Thhalv10012069m.g.v1.0, Thhalv10012071m.g.v1.0, Thhalv10012142m.g.v1.0, Thhalv10012179m.g.v1.0, Thhalv10016883m.g.v1.0, Thhalv10017071m.g.v1.0, Thhalv10017566m.g.v1.0, Thhalv10023572m.g.v1.0, Thhalv10023616m.g.v1.0, Thhalv10023897m.g.v1.0, Thhalv10023954m.g.v1.0, Thhalv10023996m.g.v1.0, Thhalv10024005m.g.v1.0, Thhalv10024153m.g.v1.0, Thhalv10026867m.g.v1.0, Thhalv10028053m.g.v1.0, Thhalv10028058m.g.v1.0, Thhalv10028109m.g.v1.0, Thhalv10028307m.g.v1.0, Thhalv10028318m.g.v1.0, Thhalv10029184m.g.v1.0, Thhalv10029219m.g.v1.0
Brassicaceae Schrenkiella parvula 18 Sp1g34680.v2.2, Sp2g04170.v2.2, Sp2g04180.v2.2 ...
Sp4g24600.v2.2, Sp4g24610.v2.2, Sp5g04440.v2.2, Sp5g04450.v2.2, Sp5g04453.v2.2, Sp5g04457.v2.2, Sp5g04460.v2.2, Sp5g04480.v2.2, Sp5g04500.v2.2, Sp5g04510.v2.2, Sp5g21580.v2.2, Sp6g09200.v2.2, Sp6g09210.v2.2, Sp7g05400.v2.2, SpUn0053_0040.v2.2
Brassicaceae Brassica nigra 59 BniB01g003420.2N, BniB01g003430.2N, BniB01g003440.2N ...
BniB01g003450.2N, BniB01g025850.2N, BniB02g000230.2N, BniB02g001350.2N, BniB02g040450.2N, BniB02g049390.2N, BniB02g051720.2N, BniB03g001240.2N, BniB03g010160.2N, BniB03g011950.2N, BniB03g051100.2N, BniB03g052390.2N, BniB03g055960.2N, BniB04g020230.2N, BniB04g020250.2N, BniB04g020290.2N, BniB04g020300.2N, BniB04g020330.2N, BniB06g001540.2N, BniB06g054900.2N, BniB06g054910.2N, BniB06g054920.2N, BniB06g054930.2N, BniB06g054940.2N, BniB06g054960.2N, BniB06g054970.2N, BniB06g054980.2N, BniB06g054990.2N, BniB06g055000.2N, BniB06g055010.2N, BniB06g055020.2N, BniB06g055030.2N, BniB06g055040.2N, BniB06g055050.2N, BniB06g055060.2N, BniB06g055080.2N, BniB06g055090.2N, BniB06g055100.2N, BniB06g055120.2N, BniB06g055130.2N, BniB06g055140.2N, BniB06g055150.2N, BniB06g063480.2N, BniB06g063490.2N, BniB06g063500.2N, BniB06g063510.2N, BniB06g063530.2N, BniB06g063540.2N, BniB07g008670.2N, BniB07g045970.2N, BniB07g046280.2N, BniB07g046490.2N, BniB08g027490.2N, BniB08g072890.2N, BniB08g072950.2N, BniB08g073000.2N
Casuarinaceae Casuarina glauca 1 Cgl05G1118
Plantaginaceae Plantago ovata 1 Pov_00021253
Poaceae Zoysia japonica 1 nbis-gene-36802
Salicaceae Populus euphratica 1 populus_peu12364
Solanaceae Solanum pennellii 1 gene-LOC107019779
Zosteraceae Zostera marina 6 Zosma01g13790.v3.1, Zosma02g07570.v3.1, Zosma03g09470.v3.1 ...
Zosma03g10120.v3.1, Zosma05g15530.v3.1, Zosma05g17230.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.