Basic Information
Locus ID:
BniB08g067380.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Pyruvate kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 62205119 | 62208308 | + | BniB08g067380.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 57,517.62 Da | 29.80 | 99.34 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00224 | Pyruvate kinase, barrel domain | 30 | 375 | 1.3E-93 | IPR015793 |
| Pfam | PF02887 | Pyruvate kinase, alpha/beta domain | 395 | 519 | 5.0E-24 | IPR015795 |
| SUPERFAMILY | SSF52935 | PK C-terminal domain-like | 358 | 522 | 3.4E-23 | IPR036918 |
| SUPERFAMILY | SSF50800 | PK beta-barrel domain-like | 96 | 186 | 1.05E-7 | IPR011037 |
| SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | 7 | 375 | 5.58E-76 | IPR015813 |
| Gene3D | G3DSA:3.20.20.60 | - | 30 | 370 | 2.2E-150 | IPR040442 |
| Gene3D | G3DSA:2.40.33.10 | - | 96 | 202 | 2.2E-150 | IPR015806 |
| Gene3D | G3DSA:3.40.1380.20 | - | 371 | 513 | 2.2E-150 | IPR036918 |
| TIGRFAM | TIGR01064 | pyruv_kin: pyruvate kinase | 30 | 516 | 2.2E-110 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 280 | 304 | 1.1E-43 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 253 | 279 | 1.1E-43 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 221 | 235 | 1.1E-43 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 85 | 101 | 1.1E-43 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 329 | 347 | 1.1E-43 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 348 | 364 | 1.1E-43 | IPR001697 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00230 (Purine metabolism)
map00230 (Purine metabolism)
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Module:
Reaction:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52990.1 | Pyruvate kinase family protein. | 0 |
| RefSeq | XP_013663105.1 | pyruvate kinase 1, cytosolic [Brassica napus] | 0 |
| B8BJ39 | Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X8B8U0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_000319 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology