Basic Information
Locus ID:
BniB08g066290.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 61536589 | 61537668 | + | BniB08g066290.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.62 | 39,340.00 Da | 46.67 | 91.20 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 58 | 324 | 3.3E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 327 | 3.64E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 342 | 5.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 131 | 9.2E-22 | - |
| SMART | SM00220 | serkin_6 | 56 | 349 | 2.5E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 327 | 34.944206 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 84 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51990.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013600326.1 | PREDICTED: serine/threonine-protein kinase-like protein At3g51990 [Brassica oleracea var. oleracea] | 0 |
| Q9SV05 | Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana OX=3702 GN=At3g51990 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7WEF0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_000384 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology