Basic Information
Locus ID:
BniB08g064430.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 60322785 | 60325505 | + | BniB08g064430.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 66,398.89 Da | 47.55 | 81.38 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 143 | 404 | 8.5448E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 143 | 405 | 2.4E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 433 | 587 | 2.87E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 141 | 439 | 2.29E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 136 | 232 | 1.1E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 423 | 514 | 3.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 233 | 420 | 9.8E-63 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 430 | 584 | 3.5E-17 | - |
| SMART | SM00220 | serkin_6 | 143 | 405 | 1.1E-100 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 447 | 482 | 8.348522 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 143 | 405 | 51.91914 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 267 | 279 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 149 | 175 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 91 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_013605294.1 | PREDICTED: CDPK-related kinase 5 [Brassica oleracea var. oleracea] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7WIG1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_000610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology