Basic Information
Locus ID:
BniB08g059680.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 56631247 | 56632938 | + | BniB08g059680.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.66 | 56,474.22 Da | 46.22 | 70.95 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 197 | 443 | 8.25622E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 195 | 443 | 3.9E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 177 | 443 | 9.98E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 272 | 478 | 8.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 271 | 3.5E-16 | - |
| SMART | SM00220 | serkin_6 | 190 | 448 | 5.8E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 190 | 446 | 41.050095 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 311 | 323 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 414 | 436 | 4.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 305 | 323 | 4.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 351 | 361 | 4.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 267 | 280 | 4.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 370 | 392 | 4.1E-20 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 66 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46930.2 | - | 0 |
| RefSeq | XP_013628194.1 | PREDICTED: serine/threonine-protein kinase HT1 [Brassica oleracea var. oleracea] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3BHP0 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 GN=106334456 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology