Basic Information
Locus ID:
BniB08g059010.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 55926735 | 55928486 | - | BniB08g059010.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.81 | 29,863.77 Da | 23.62 | 109.19 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 19 | 133 | 6.2E-22 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 188 | 267 | 8.5E-12 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 187 | 257 | 1.59E-15 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 4 | 139 | 1.4E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 178 | 258 | 4.2E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 184 | 272 | 11.368696 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14840.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_013704613.1 | probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Brassica napus] | 0 |
| C0LGN2 | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5D966 | GPCR kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_086250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19151, jg24283 |
| Brassicaceae | Brassica nigra | 1 | BniB08g059010.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0910, Ceq04G0500 |
| Poaceae | Echinochloa crus-galli | 1 | CH08.1473 |
| Poaceae | Oryza coarctata | 1 | Oco18G002890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.130 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-11097, nbisL1-mrna-24160 |
| Rhizophoraceae | Rhizophora mangle | 8 | nbisL1-mrna-15312, nbisL1-mrna-15313, nbisL1-mrna-15314 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu26044 |