Basic Information
Locus ID:
BniB08g057580.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 53961568 | 53961801 | + | BniB08g057580.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 8,997.94 Da | 30.50 | 101.17 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_009141435.1 | E3 ubiquitin-protein ligase MBR2 [Brassica rapa] | 0 |
| TrEMBL | A0A8S9P397 | DUF223 domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q69_00006665 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10002215m.g.v1.0 |
| Brassicaceae | Brassica nigra | 24 | BniB01g016270.2N, BniB01g039860.2N, BniB01g039880.2N ... |