Basic Information
Locus ID:
BniB08g056860.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 52412344 | 52418117 | + | BniB08g056860.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 143,330.39 Da | 49.15 | 84.27 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 96 | 427 | 3.0E-111 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 90 | 462 | 2.75E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 84 | 439 | 1.9E-136 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 88 | 435 | 8.5E-159 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 90 | 427 | 119.521278 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 323 | 334 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 324 | 342 | 2.2E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 377 | 398 | 2.2E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 291 | 308 | 2.2E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 162 | 183 | 2.2E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 806 | 826 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 53 | - | - |
| Coils | Coil | Coil | 576 | 637 | - | - |
| Coils | Coil | Coil | 434 | 454 | - | - |
| Coils | Coil | Coil | 768 | 795 | - | - |
| Coils | Coil | Coil | 1208 | 1228 | - | - |
| Coils | Coil | Coil | 830 | 878 | - | - |
| Coils | Coil | Coil | 702 | 736 | - | - |
| Coils | Coil | Coil | 939 | 973 | - | - |
| Coils | Coil | Coil | 1117 | 1179 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_009123287.1 | kinesin-like protein KIN-12E isoform X2 [Brassica rapa] | 0 |
| F4J1U4 | Kinesin-like protein KIN-12E OS=Arabidopsis thaliana OX=3702 GN=KIN12E PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X8BCV6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_001202 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology