Basic Information
Locus ID:
BniB08g052190.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 35591019 | 35591966 | + | BniB08g052190.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.24 | 23,347.60 Da | 43.97 | 74.67 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 177 | 213 | 5.00579E-16 | - |
| Pfam | PF19026 | HYPK UBA domain | 174 | 213 | 1.7E-13 | IPR044034 |
| Pfam | PF01849 | NAC domain | 68 | 122 | 1.3E-22 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 74 | 127 | 1.3E-30 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 175 | 212 | 2.4E-19 | - |
| SMART | SM01407 | NAC_2 | 68 | 124 | 2.5E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 65 | 130 | 17.545561 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 55 | - | - |
| Coils | Coil | Coil | 9 | 29 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10480.2 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_013608944.1 | PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 4 [Brassica oleracea var. oleracea] | 0 |
| Q9SZY1 | Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g10480 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WJH2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_001485 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology