Basic Information
Locus ID:
BniB08g046200.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 29066174 | 29069734 | - | BniB08g046200.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 85,651.89 Da | 49.48 | 93.15 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 492 | 764 | 5.8E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 49 | 88 | 6.3E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 469 | 764 | 2.8E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 253 | 2.17E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 568 | 776 | 1.2E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 276 | 7.6E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 458 | 567 | 3.2E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 490 | 768 | 34.675663 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 421 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_018457702.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Raphanus sativus] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WJN5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_001951 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology