Basic Information
Locus ID:
BniB08g045290.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 28444438 | 28445904 | + | BniB08g045290.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 54,217.94 Da | 39.56 | 89.18 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 163 | 430 | 6.26534E-103 | - |
| Pfam | PF00069 | Protein kinase domain | 158 | 425 | 1.9E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 137 | 430 | 1.67E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 140 | 232 | 6.1E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 233 | 443 | 1.4E-61 | - |
| SMART | SM00220 | serkin_6 | 157 | 429 | 5.1E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 157 | 416 | 38.350502 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 280 | 292 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 163 | 185 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 94 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013611165.1 | PREDICTED: probable serine/threonine-protein kinase At1g01540 [Brassica oleracea var. oleracea] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7WKE9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002025 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology