Basic Information
Locus ID:
BniB08g045120.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 28352124 | 28357212 | + | BniB08g045120.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 171,906.03 Da | 44.94 | 77.68 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 930 | 1183 | 6.54387E-127 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1330 | 1594 | 1.5E-125 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 961 | 1095 | 8.2E-22 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 952 | 1095 | 2.22E-15 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 938 | 1192 | 4.4E-52 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 845 | 1608 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 958 | 1192 | 28.627399 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 705 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1237 | 1257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 655 | - | - |
| Coils | Coil | Coil | 301 | 321 | - | - |
| Coils | Coil | Coil | 405 | 425 | - | - |
| Coils | Coil | Coil | 1288 | 1308 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_018456004.1 | PREDICTED: translocase of chloroplast 159, chloroplastic [Raphanus sativus] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WHD4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002034 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology