Basic Information
Locus ID:
BniB08g043180.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
1-phosphatidylinositol-4-phosphate 5-kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 26801769 | 26809761 | + | BniB08g043180.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 193,060.83 Da | 44.77 | 81.31 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04051 | C2_SRC2_like | 1016 | 1138 | 1.83354E-37 | IPR044750 |
| Pfam | PF13692 | Glycosyl transferases group 1 | 333 | 469 | 4.4E-7 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1349 | 1679 | 7.8E-72 | IPR002498 |
| Pfam | PF00168 | C2 domain | 1015 | 1110 | 2.9E-11 | IPR000008 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 1015 | 1149 | 7.33E-15 | IPR035892 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 155 | 471 | 3.33E-13 | - |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1295 | 1680 | 1.63E-86 | - |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 1011 | 1123 | 1.6E-9 | IPR035892 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 288 | 492 | 5.2E-13 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 1428 | 1680 | 9.8E-40 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1259 | 1427 | 5.3E-37 | IPR027484 |
| SMART | SM00239 | C2_3c | 1015 | 1118 | 2.6E-10 | IPR000008 |
| SMART | SM00330 | PIPK_2 | 1287 | 1681 | 2.1E-159 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1257 | 1680 | 54.15155 | IPR002498 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 997 | 1121 | 12.523796 | IPR000008 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1558 | 1579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 979 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1163 | 1195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 993 | - | - |
| Coils | Coil | Coil | 957 | 988 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
ko04072 (Phospholipase D signaling pathway)
map04072 (Phospholipase D signaling pathway)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
map04666 (Fc gamma R-mediated phagocytosis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01210.1 | glycosyl transferase family 1 protein. | 0 |
| RefSeq | XP_048625471.1 | uncharacterized protein LOC125593222 [Brassica napus] | 0 |
| Q9M149 | Putative phosphatidylinositol 4-phosphate 5-kinase 11 OS=Arabidopsis thaliana OX=3702 GN=PIP5K11 PE=4 SV=1 | 0 | |
| TrEMBL | A0A816IQV8 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C09P00760.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg1971, jg29608 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_1671 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah022918 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g003800 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4033, Sbi_jg49235 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg6006 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000520 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl10996, Sgl16405 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000014010, gene:ENSEOMG00000036069 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0003650, CQ.Regalona.r1.2BG0025590 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30005190 |
| Apiaceae | Apium graveolens | 1 | Ag6G01565 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G003450, COCNU_14G001920 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103708367, gene-LOC103716003 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1738.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri5G06273, Ftri7G00228 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G01210.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10028385m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g00910.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB08g041460.2N, BniB08g043180.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1210 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1250 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno12g01990, gene.Cymno16g02230 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g17260, gene.Thate09g15410 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.775 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00039287 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G03584, Lb4G25409 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.2376, BH02.2485, CH02.2665 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0025080, gene-QOZ80_1BG0075630 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0273270.1 |
| Poaceae | Oryza coarctata | 1 | Oco02G015170 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g43380.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G199300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0603414, Pt_Chr0603434 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G015010, Chr03G011330, Chr08G011530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G384300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG033640, gene_TRIDC3BG038180 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G224700.1, TraesCS3B02G254200.3 ... |
| Poaceae | Zea mays | 2 | Zm00001eb159550_P002, Zm00001eb358450_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-29214, nbis-gene-50536 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10678, Zma_g8246 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG04.2215, evm.TU.LG06.89, evm.TU.LG19.1245 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g08260 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.561 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21676 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6975 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7366 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.234 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017653 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-1731 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-19592 |
| Salicaceae | Populus euphratica | 2 | populus_peu27619, populus_peu31608 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645507 |
| Solanaceae | Solanum chilense | 1 | SOLCI004775700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107006478 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.28958_chr11_-, gene_15213 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G2172 |
| Zosteraceae | Zostera marina | 2 | Zosma01g09490.v3.1, Zosma05g13790.v3.1 |