Basic Information
Locus ID:
BniB08g042990.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 26688591 | 26690511 | - | BniB08g042990.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 52,498.34 Da | 39.04 | 94.11 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 171 | 437 | 1.10363E-108 | - |
| Pfam | PF00069 | Protein kinase domain | 168 | 434 | 2.4E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 145 | 437 | 7.42E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 147 | 240 | 5.4E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 241 | 454 | 5.1E-64 | - |
| SMART | SM00220 | serkin_6 | 165 | 443 | 2.2E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 165 | 443 | 38.308098 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 171 | 193 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 287 | 299 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01330.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018456895.1 | PREDICTED: probable serine/threonine-protein kinase At1g01540 isoform X1 [Raphanus sativus] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7WJW3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002279 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology