Basic Information
Locus ID:
BniB08g042540.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Calmodulin-binding receptor-like cytoplasmic kinase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 26453217 | 26454886 | - | BniB08g042540.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 46,458.75 Da | 43.69 | 73.33 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 130 | 400 | 7.78946E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 129 | 398 | 5.2E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 403 | 4.59E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 86 | 202 | 6.7E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 203 | 413 | 7.0E-58 | - |
| SMART | SM00220 | serkin_6 | 124 | 402 | 1.1E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 381 | 39.113739 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 156 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00330.1 | calmodulin-binding receptor-like cytoplasmic kinase 2. high overall homology to CRCK1 | 0 |
| RefSeq | XP_048624808.1 | calmodulin-binding receptor-like cytoplasmic kinase 2 [Brassica napus] | 0 |
| Q8VZJ9 | Calmodulin-binding receptor-like cytoplasmic kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRCK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8BDN4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology