Basic Information
Locus ID:
BniB08g041420.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 25698042 | 25700033 | - | BniB08g041420.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 54,444.36 Da | 48.81 | 93.39 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 70 | 145 | 4.78307E-11 | - |
| Pfam | PF00651 | BTB/POZ domain | 72 | 159 | 1.7E-10 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 187 | 277 | 2.3E-7 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 72 | 160 | 3.37E-11 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 45 | 177 | 8.0E-14 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 194 | 300 | 5.4E-11 | - |
| SMART | SM00225 | BTB_4 | 19 | 162 | 6.1E-7 | IPR000210 |
| SMART | SM00875 | BACK_2 | 177 | 279 | 4.6E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 71 | 130 | 10.095861 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 62 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_048605953.1 | BTB/POZ domain-containing protein At4g01160-like [Brassica napus] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X8BE72 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002328 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology