Basic Information
Locus ID:
BniB08g038790.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 23629588 | 23633457 | + | BniB08g038790.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 84,283.49 Da | 52.18 | 94.81 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 480 | 752 | 2.7E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 3.5E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 752 | 3.51E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 236 | 1.02E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 556 | 765 | 1.1E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 260 | 8.6E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 446 | 555 | 3.8E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 478 | 756 | 34.124435 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 368 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_018461071.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Raphanus sativus] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WM83 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002530 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology