HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: BniB08g037860.2N
Species & Taxonomic ID: Brassica nigra & 3710
Genome Assembly: N100
Description: Inorganic pyrophosphatase
Maps and Mapping Data
Chromosome Start End Strand ID
B8 22709847 22710080 - BniB08g037860.2N
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.85 8,802.46 Da 55.84 116.36 0.34
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K01507 (inorganic pyrophosphatase [EC:3.6.1.1])
Pathway:
ko00190 (Oxidative phosphorylation) map00190 (Oxidative phosphorylation)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_018461371.1 PREDICTED: RING-H2 finger protein ATL72-like [Raphanus sativus] 0
TrEMBL A0A816IXB4 (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C09P35650.1 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Eutrema salsugineum 1 Thhalv10002215m.g.v1.0
Brassicaceae Brassica nigra 24 BniB01g016270.2N, BniB01g039860.2N, BniB01g039880.2N ...
BniB01g039890.2N, BniB01g049740.2N, BniB02g018380.2N, BniB02g026360.2N, BniB02g062300.2N, BniB03g004860.2N, BniB04g023280.2N, BniB04g037930.2N, BniB04g040180.2N, BniB04g046590.2N, BniB04g049090.2N, BniB05g010610.2N, BniB05g034750.2N, BniB05g052190.2N, BniB05g056080.2N, BniB06g022980.2N, BniB07g012780.2N, BniB08g008500.2N, BniB08g037860.2N, BniB08g057580.2N, BniB08g057890.2N
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.