Basic Information
Locus ID:
BniB08g037020.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 21982550 | 21984756 | - | BniB08g037020.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 53,743.06 Da | 53.18 | 75.65 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 338 | 377 | 0.031 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 296 | 332 | 2.5E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 426 | 462 | 1.3E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 181 | 470 | 5.13E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 159 | 467 | 2.9E-119 | IPR015943 |
| SMART | SM00320 | WD40_4 | 380 | 420 | 180.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 252 | 289 | 0.66 | IPR001680 |
| SMART | SM00320 | WD40_4 | 209 | 249 | 0.37 | IPR001680 |
| SMART | SM00320 | WD40_4 | 293 | 332 | 3.6E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 335 | 377 | 0.0024 | IPR001680 |
| SMART | SM00320 | WD40_4 | 423 | 462 | 5.0E-8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 430 | 463 | 14.084198 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 300 | 341 | 12.947979 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 300 | 332 | 10.469233 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 430 | 463 | 11.65559 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 449 | 463 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11920.1 | cell cycle switch protein 52 A2. Encodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication. | 0 |
| RefSeq | XP_013740838.2 | protein FIZZY-RELATED 1-like [Brassica napus] | 0 |
| Q8VZS9 | Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=FZR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WNR8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002663 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology