Basic Information
Locus ID:
BniB08g036970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 21969114 | 21970775 | + | BniB08g036970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 40,606.76 Da | 60.07 | 84.58 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 41 | 307 | 2.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 345 | 8.75E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 112 | 8.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 315 | 8.4E-52 | - |
| SMART | SM00220 | serkin_6 | 37 | 309 | 3.5E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 310 | 35.410629 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 159 | 171 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 65 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11890.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018474568.1 | PREDICTED: cysteine-rich receptor-like protein kinase 45 [Raphanus sativus] | 0 |
| Q8GY82 | Cysteine-rich receptor-like protein kinase 45 OS=Arabidopsis thaliana OX=3702 GN=CRK45 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WJL1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002666 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G11890.3 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029460m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g05590.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g036970.2N |