Basic Information
Locus ID:
BniB08g035970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 21114756 | 21118942 | - | BniB08g035970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 102,469.21 Da | 47.77 | 82.42 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 741 | 894 | 1.6504E-57 | - |
| Pfam | PF06337 | DUSP domain | 44 | 137 | 2.6E-25 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 306 | 893 | 2.8E-84 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 17 | 137 | 2.22E-30 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 303 | 896 | 8.83E-112 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 150 | 236 | 3.3E-7 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 711 | 904 | 1.7E-59 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 8 | 149 | 3.4E-38 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 297 | 501 | 2.7E-67 | - |
| SMART | SM00695 | dusp | 39 | 139 | 2.9E-40 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 20 | 136 | 20.150551 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 305 | 896 | 57.999325 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 306 | 321 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 838 | 855 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 674 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_018476383.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Raphanus sativus] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X7WLA1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002746 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology