Basic Information
Locus ID:
BniB08g033950.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 19086192 | 19088016 | + | BniB08g033950.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 39,346.17 Da | 46.38 | 92.85 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 29 | 283 | 7.16416E-109 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 26 | 283 | 6.1E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 307 | 1.48E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 300 | 1.5E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 103 | 6.1E-23 | - |
| SMART | SM00220 | serkin_6 | 23 | 287 | 2.3E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 287 | 43.297401 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 143 | 155 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 29 | 50 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 254 | 276 | 1.7E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 99 | 112 | 1.7E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 211 | 233 | 1.7E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 137 | 155 | 1.7E-10 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013621816.1 | PREDICTED: serine/threonine-protein kinase HT1 [Brassica oleracea var. oleracea] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A397ZY56 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA03T11982Z PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology