Basic Information
Locus ID:
BniB08g033830.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 18933023 | 18935056 | - | BniB08g033830.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 42,210.95 Da | 42.06 | 84.42 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 83 | 351 | 1.8334E-117 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 79 | 350 | 2.0E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 351 | 1.31E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 66 | 160 | 2.5E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 370 | 9.3E-62 | - |
| SMART | SM00220 | serkin_6 | 77 | 351 | 2.1E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 351 | 41.177303 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 218 | 230 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 322 | 344 | 6.8E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 278 | 300 | 6.8E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 174 | 187 | 6.8E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 212 | 230 | 6.8E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 52 | - | - |
| Coils | Coil | Coil | 16 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009134038.1 | serine/threonine-protein kinase STY13 [Brassica rapa] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WLN7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002926 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology